Across TCGA patient cohorts, SNORD90 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,185 significant associations in total. STAD shows the largest number of these associations.

The most reproducible SNORD90-associated GO terms across cancer lineages are Alternative mRNA splicing, via spliceosome, Regulation of proteasomal protein catabolic process, and Negative regulation of calcium ion transmembrane transporter activity. Each is linked with SNORD90 in more than 8 cancer types. Because this analysis shows association rather than direction, both SNORD90-to-partner and partner-to-SNORD90 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SNORD90→partner) and Y-score (partner→SNORD90) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Alternative mRNA splicing, via spliceosome →	+0.034	+0.272	<.001	<.001	3	8
STAD	Regulation of proteasomal protein catabolic process →	+0.062	+0.318	<.001	<.001	3	8
STAD	Negative regulation of calcium ion transmembrane transporter activity →	+0.048	+0.354	<.001	<.001	3	7
STAD	Positive regulation of post-translational protein modification →	+0.031	+0.263	<.001	<.001	3	7
STAD	Positive regulation of protein modification by small protein conjugation or removal →	+0.032	+0.261	<.001	<.001	3	7
STAD	Protein folding →	+0.031	+0.221	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,185 associations by consensus.

Exploration

SNORD90 survival (RNA) · tumor vs normal (RNA) · all SNORD90 data types