SNORD116-3

mutation — cross-omics
Cross-omicsMUTATION → IMMUNEPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SNORD116-3 mutation is significantly associated with the immune_cell of many other genes, with 3 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SNORD116-3-associated genes across cancer lineages are CD8+ T-cells, CD8+ Tcm, and CD8+ Tem. Each is linked with SNORD116-3 in more than 1 cancer types. Because this analysis shows association rather than direction, both SNORD116-3-to-partner and partner-to-SNORD116-3 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SNORD116-3→partner) and Y-score (partner→SNORD116-3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCD8+ T-cells →+0.076+4.845<.001.01131
UCECCD8+ Tcm →+0.057+4.935.003.01031
UCECCD8+ Tem →+0.014+7.066<.001.01131
Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

Exploration