Across TCGA pan-cancer cohorts, SNORD115-45 RNA differs between tumor and matched normal tissue in 4 of 18 cancer types tested, making tumor–normal expression one of SNORD115-45’s most consistent transcriptional readouts.
The strongest signal is observed in thyroid carcinoma (THCA), where SNORD115-45 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types SNORD115-45 is over-expressed in tumor, although a few such as KIRP show the opposite, repressed pattern.
THCA, KIRP, and BRCA are the cancer types where SNORD115-45 tumor–normal differential expression is most reproducible.