SNORD115-29

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SNORD115-29 mutation is significantly associated with the RNA expression of many other genes, with 74 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible SNORD115-29-associated genes across cancer lineages are MIR5692C1, ATP5MFP1, and OR8B12. Each is linked with SNORD115-29 in more than 1 cancer types. Because this analysis shows association rather than direction, both SNORD115-29-to-partner and partner-to-SNORD115-29 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SNORD115-29→partner) and Y-score (partner→SNORD115-29) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMMIR5692C1 →+0.374+4.328<.001.00732
SKCMATP5MFP1 →+0.261+5.332<.001<.00132
LUADOR8B12 →+0.135+5.888<.001.00231
LUADSPATA31A6 →+0.018+5.217<.001.00731
LUADRNU6-921P →+0.292+5.481.002.00531
LUADADIPOQ-AS1 →+0.031+5.217<.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 74 associations by consensus.

Exploration