SNHG4

Across TCGA patient cohorts, SNHG4 RNA expression is significantly associated with the protein abundance of many other proteins, with 17,790 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SNHG4-associated proteins across cancer lineages are WDR36, GEMIN5, and NAT10. Each is linked with SNHG4 in more than 8 cancer types. Because this analysis shows association rather than direction, both SNHG4-to-partner and partner-to-SNHG4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SNHG4 versus WDR36 in BRCA, with a Pearson correlation of 0.44.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SNHG4→partner) and Y-score (partner→SNHG4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	WDR36 →	+0.382	+1.070	<.001	<.001	3	9
OV	GEMIN5 →	+0.280	+1.120	<.001	<.001	3	8
BRCA	NAT10 →	+0.419	+0.835	<.001	<.001	3	8
BRCA	POLR1E →	+0.315	+0.745	<.001	<.001	3	8
LSCC	TBL3 →	+0.275	+0.868	<.001	<.001	3	8
LSCC	UTP18 →	+0.403	+1.050	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 17,790 associations by consensus.

SNHG4 vs WDR36 — BRCA

Explore this scatter interactively →