SNHG29

Across TCGA patient cohorts, SNHG29 RNA expression is significantly associated with the protein abundance of many other proteins, with 16,571 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SNHG29-associated proteins across cancer lineages are DNTTIP2, SPAG7, and ELAC2. Each is linked with SNHG29 in more than 6 cancer types. Because this analysis shows association rather than direction, both SNHG29-to-partner and partner-to-SNHG29 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SNHG29 versus DNTTIP2 in LSCC, with a Pearson correlation of 0.54.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SNHG29→partner) and Y-score (partner→SNHG29) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	DNTTIP2 →	+0.343	+0.792	<.001	<.001	3	7
OV	SPAG7 →	+0.396	+0.922	<.001	<.001	3	7
LSCC	ELAC2 →	+0.485	+0.790	<.001	<.001	3	6
OV	FBL →	+0.437	+0.992	<.001	<.001	3	6
LSCC	WDR12 →	+0.435	+0.612	<.001	<.001	3	6
GBM	NCOR1 →	+0.280	+0.348	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 16,571 associations by consensus.

SNHG29 vs DNTTIP2 — LSCC

Explore this scatter interactively →