Across TCGA patient cohorts, SNHG28 RNA expression is significantly associated with the mutation status of many other genes, with 7,964 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SNHG28-associated genes across cancer lineages are LAMA1, UNC13C, and MED12L. Each is linked with SNHG28 in more than 2 cancer types. Because this analysis shows association rather than direction, both SNHG28-to-partner and partner-to-SNHG28 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SNHG28→partner) and Y-score (partner→SNHG28) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	LAMA1 →	-1.295	-0.363	<.001	<.001	3	3
UCEC	UNC13C →	-1.614	-0.460	<.001	<.001	3	3
UCEC	MED12L →	-1.366	-0.412	<.001	<.001	3	3
UCEC	EYS →	-1.196	-0.392	<.001	<.001	3	3
UCEC	PCDHA1 →	-1.584	-0.489	<.001	<.001	3	3
UCEC	MYCBP2 →	-1.893	-0.549	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,964 associations by consensus.

Exploration

SNHG28 survival (RNA) · tumor vs normal (RNA) · all SNHG28 data types