SNCB

Across TCGA cell cohorts, SNCB RNA expression is significantly associated with the go_rna of many other GO terms, with 1,876 significant associations in total. LUNG_SCLC shows the largest number of these associations.

The most reproducible SNCB-associated GO terms across cancer lineages are Ribonucleoside triphosphate biosynthetic process, Mitochondrial membrane organization, and Inner mitochondrial membrane organization. Each is linked with SNCB in more than 7 cancer types. Because this analysis shows association rather than direction, both SNCB-to-partner and partner-to-SNCB results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Ribonucleoside triphosphate biosynthetic process grouped by SNCB-low versus SNCB-high in STOMACH.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SNCB→partner) and Y-score (partner→SNCB) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STOMACH	Ribonucleoside triphosphate biosynthetic process →	+0.085	+0.598	.003	.008	3	8
BREAST	Mitochondrial membrane organization →	+0.072	+0.766	.001	.008	3	8
SOFT_TISSUE	Inner mitochondrial membrane organization →	+0.034	+0.741	.009	.007	3	8
LUNG_SCLC	Protein localization to mitochondrion →	+0.079	+1.925	<.001	<.001	3	7
SKIN	Positive regulation of sodium ion transport →	-0.176	-0.679	<.001	<.001	3	7
LUNG_SCLC	Respiratory electron transport chain →	+0.091	+1.492	.001	.002	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 1,876 associations by consensus.

Ribonucleoside triphosphate biosynthetic process by SNCB expression — STOMACH

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