SNCA-AS1

Across TCGA patient cohorts, SNCA-AS1 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,085 significant associations in total. STAD shows the largest number of these associations.

The most reproducible SNCA-AS1-associated GO terms across cancer lineages are Mitochondrial transport, SNARE complex assembly, and Regulation of SNARE complex assembly. Each is linked with SNCA-AS1 in more than 21 cancer types. Because this analysis shows association rather than direction, both SNCA-AS1-to-partner and partner-to-SNCA-AS1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Mitochondrial transport grouped by SNCA-AS1-low versus SNCA-AS1-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SNCA-AS1→partner) and Y-score (partner→SNCA-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Mitochondrial transport →	+0.067	+0.070	<.001	<.001	3	22
STAD	SNARE complex assembly →	+0.048	+0.054	<.001	<.001	3	21
THYM	Regulation of SNARE complex assembly →	+0.064	+0.079	<.001	.001	3	21
STAD	Establishment of protein localization to membrane →	+0.065	+0.066	<.001	<.001	3	20
ESCA	DNA replication →	+0.063	+0.071	.002	<.001	3	19
STAD	Negative regulation of protein catabolic process →	+0.063	+0.074	<.001	<.001	3	19

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,085 associations by consensus.

Mitochondrial transport by SNCA-AS1 expression — STAD

Explore this box plot interactively →