SNAPC4

Across TCGA patient cohorts, SNAPC4 protein abundance is significantly associated with the RNA expression of many other genes, with 4,526 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SNAPC4-associated genes across cancer lineages are NUP214, CEP78, and INPP5E. Each is linked with SNAPC4 in more than 3 cancer types. Because this analysis shows association rather than direction, both SNAPC4-to-partner and partner-to-SNAPC4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SNAPC4 versus NUP214 in GBM, with a Pearson correlation of 0.45.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SNAPC4→partner) and Y-score (partner→SNAPC4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	NUP214 →	+0.565	+0.490	.004	.004	3	4
GBM	CEP78 →	+0.654	+0.469	.001	<.001	3	4
LUAD	INPP5E →	+0.460	+0.577	<.001	<.001	3	4
GBM	QSOX2 →	+0.590	+0.627	.002	<.001	3	4
LSCC	ENTR1 →	+0.546	+0.365	<.001	<.001	3	4
UCEC	ZMYND19 →	+0.818	+0.432	.007	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,526 associations by consensus.

SNAPC4 vs NUP214 — GBM

Explore this scatter interactively →