SMOC1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SMOC1 protein abundance is significantly associated with the RNA expression of many other genes, with 8,141 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SMOC1-associated genes across cancer lineages are SLC16A14, EYS, and ARMH4. Each is linked with SMOC1 in more than 3 cancer types. Because this analysis shows association rather than direction, both SMOC1-to-partner and partner-to-SMOC1 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SMOC1→partner) and Y-score (partner→SMOC1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADSLC16A14 →+1.077+0.831<.001<.00134
GBMEYS →+0.664+1.372.002<.00134
CCRCCARMH4 →+0.577+0.421.003.00534
CCRCCSFRP1 →+1.936+0.765<.001<.00134
GBMPDE1A →+0.850+0.986<.001<.00133
GBMSLC8A3 →+0.904+1.118<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,141 associations by consensus.

Exploration