SMKR1

Across TCGA patient cohorts, SMKR1 RNA expression is significantly associated with the RNA expression of many other genes, with 16,291 significant associations in total. TGCT shows the largest number of these associations.

The most reproducible SMKR1-associated genes across cancer lineages are TTC26, ZC3HC1, and SSBP1. Each is linked with SMKR1 in more than 28 cancer types. Because this analysis shows association rather than direction, both SMKR1-to-partner and partner-to-SMKR1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SMKR1 versus TTC26 in CHOL, with a Pearson correlation of 0.53.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SMKR1→partner) and Y-score (partner→SMKR1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CHOL	TTC26 →	+1.160	+1.443	<.001	<.001	2	29
TGCT	ZC3HC1 →	+0.660	+1.329	<.001	<.001	3	28
UCS	SSBP1 →	+0.689	+1.957	<.001	<.001	3	27
TGCT	BUD23 →	+0.800	+1.385	<.001	<.001	3	27
UVM	HSPE1 →	+0.708	+0.588	<.001	<.001	3	27
SCLC	MRPS33 →	+1.066	+1.170	.007	<.001	2	27

Each partner links to its Q-omics profile. Showing the 6 strongest of 16,291 associations by consensus.

SMKR1 vs TTC26 — CHOL

Explore this scatter interactively →