Across TCGA patient cohorts, SMIM9 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,670 significant associations in total. STAD shows the largest number of these associations.

The most reproducible SMIM9-associated GO terms across cancer lineages are Nucleoside phosphate biosynthetic process, Endoplasmic reticulum to Golgi vesicle-mediated transport, and Positive regulation of double-strand break repair via homologous recombination. Each is linked with SMIM9 in more than 19 cancer types. Because this analysis shows association rather than direction, both SMIM9-to-partner and partner-to-SMIM9 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SMIM9→partner) and Y-score (partner→SMIM9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Nucleoside phosphate biosynthetic process →	+0.061	+0.065	<.001	<.001	3	20
STAD	Endoplasmic reticulum to Golgi vesicle-mediated transport →	+0.067	+0.077	<.001	<.001	3	17
ESCA	Positive regulation of double-strand break repair via homologous recombination →	+0.065	+0.107	<.001	.004	3	17
STAD	Negative regulation of transferase activity →	+0.060	+0.065	<.001	<.001	3	16
STAD	Neuron apoptotic process →	+0.054	+0.078	<.001	<.001	3	16
STAD	Regulation of mRNA catabolic process →	+0.058	+0.082	<.001	<.001	3	16

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,670 associations by consensus.

Exploration

SMIM9 survival (RNA) · tumor vs normal (RNA) · all SMIM9 data types