Across TCGA cell cohorts, SMIM9 RNA expression is significantly associated with the mutation status of many other genes, with 130 significant associations in total. LUNG_SCLC shows the largest number of these associations.

The most reproducible SMIM9-associated genes across cancer lineages are FAM71B, COL22A1, and SERPINB4. Each is linked with SMIM9 in more than 1 cancer types. Because this analysis shows association rather than direction, both SMIM9-to-partner and partner-to-SMIM9 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SMIM9→partner) and Y-score (partner→SMIM9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
PANCREAS	FAM71B →	+4.029	+0.022	.007	<.001	3	2
LUNG_SCLC	COL22A1 →	+1.647	+0.022	.005	.006	3	2
LUNG_SCLC	SERPINB4 →	+3.817	+0.061	.004	<.001	3	2
LUNG_NSCLC_LUAD	PDXDC1 →	+3.734	+0.029	.006	<.001	3	2
LUNG_NSCLC_LUAD	ARSF →	+3.734	+0.031	.006	<.001	3	2
PANCREAS	SETX →	+4.614	+0.027	.004	<.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 130 associations by consensus.

Exploration

SMIM9 survival (RNA) · tumor vs normal (RNA) · all SMIM9 data types