SMIM8

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SMIM8 mutation is significantly associated with the RNA expression of many other genes, with 3 significant associations in total. BLOOD_Myeloma shows the largest number of these associations.

The most reproducible SMIM8-associated genes across cancer lineages are LRRC74A, SERPINA7, and C1orf158. Each is linked with SMIM8 in more than 1 cancer types. Because this analysis shows association rather than direction, both SMIM8-to-partner and partner-to-SMIM8 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, LRRC74A grouped by SMIM8-low versus SMIM8-high in BLOOD_Myeloma.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SMIM8→partner) and Y-score (partner→SMIM8) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_MyelomaLRRC74A →+0.013+4.807<.001.00631
BLOOD_MyelomaSERPINA7 →+0.459+4.807<.001.00631
BLOOD_MyelomaC1orf158 →+0.053+4.807<.001.00631
Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

LRRC74A by SMIM8 expression — BLOOD_Myeloma

Box plot of LRRC74A in SMIM8-low vs SMIM8-high samples in BLOOD_Myeloma.

Explore this box plot interactively →

Exploration