Across TCGA patient cohorts, SMIM29 protein abundance is significantly associated with the RNA expression of many other genes, with 3,537 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible SMIM29-associated genes across cancer lineages are CEACAM3, UBR5-AS1, and MIR5692B. Each is linked with SMIM29 in more than 2 cancer types. Because this analysis shows association rather than direction, both SMIM29-to-partner and partner-to-SMIM29 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SMIM29→partner) and Y-score (partner→SMIM29) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	CEACAM3 →	-0.831	-0.996	.007	.005	3	2
UCEC	UBR5-AS1 →	+0.729	+1.302	.005	.004	3	2
UCEC	MIR5692B →	+1.843	+0.810	<.001	.003	3	2
LUAD	TPP1 →	+0.428	+0.394	.004	<.001	3	2
BRCA	C17orf58 →	+1.115	+0.589	.001	<.001	3	2
LUAD	VMP1 →	+0.414	+0.396	.005	.002	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,537 associations by consensus.

Exploration

SMIM29 survival (RNA) · tumor vs normal (RNA) · all SMIM29 data types