SMIM20

Across TCGA patient cohorts, SMIM20 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,074 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible SMIM20-associated proteins across cancer lineages are HTT, MRPL16, and RALY_S135. Each is linked with SMIM20 in more than 3 cancer types. Because this analysis shows association rather than direction, both SMIM20-to-partner and partner-to-SMIM20 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SMIM20 versus HTT in LSCC, with a Pearson correlation of 0.36.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SMIM20→partner) and Y-score (partner→SMIM20) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	HTT →	+0.196	+0.429	<.001	<.001	3	4
BRCA	MRPL16 →	-0.308	-0.398	<.001	.002	3	3
PDAC	RALY_S135 →	-0.246	-0.244	.001	.005	3	3
PDAC	SP110_S380 →	-0.617	-0.393	<.001	<.001	3	3
LSCC	SP140_S291 →	-0.743	-0.291	<.001	.005	3	3
GBM	TOMM34 →	+0.344	+0.323	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 8,074 associations by consensus.

SMIM20 vs HTT — LSCC

Explore this scatter interactively →