SMIM20

Across TCGA cell cohorts, SMIM20 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,259 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible SMIM20-associated GO terms across cancer lineages are Cell-substrate junction assembly, Glucosamine metabolic process, and Amino sugar metabolic process. Each is linked with SMIM20 in more than 7 cancer types. Because this analysis shows association rather than direction, both SMIM20-to-partner and partner-to-SMIM20 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Cell-substrate junction assembly grouped by SMIM20-low versus SMIM20-high in STOMACH.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SMIM20→partner) and Y-score (partner→SMIM20) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STOMACH	Cell-substrate junction assembly →	-0.178	-1.077	.003	.002	3	8
PANCREAS	Glucosamine metabolic process →	+0.105	+0.779	<.001	<.001	3	8
UPPER_AERODIGESTIVE_TRACT	Amino sugar metabolic process →	+0.084	+1.277	<.001	<.001	3	7
LARGE_INTESTINE	Purine deoxyribonucleoside monophosphate biosynthetic process →	+0.118	+0.842	<.001	<.001	3	7
LARGE_INTESTINE	DAMP biosynthetic process →	+0.118	+0.842	<.001	<.001	3	7
OVARY	Positive regulation of bone development →	+1.135	+0.744	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,259 associations by consensus.

Cell-substrate junction assembly by SMIM20 expression — STOMACH

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