SMIM15-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, SMIM15-AS1 RNA differs between tumor and matched normal tissue in 6 of 18 cancer types tested, making tumor–normal expression one of SMIM15-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in pancreatic adenocarcinoma (PAAD), where SMIM15-AS1 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types SMIM15-AS1 is over-expressed in tumor, although a few such as UCEC and THCA show the opposite, repressed pattern.

PAAD, LIHC, and UCEC are the cancer types where SMIM15-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in SMIM15-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
PAADAllAll+0.487.0276view →
LIHCMaleAll+0.131<.0016view →
UCECAllAll−0.317.0132view →
THCAAllAll−0.166.0032view →
HNSCMaleAll+0.152.0152view →
CHOLAllAll+0.307.0331view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 6 strongest of 6 lineages.

SMIM15-AS1–PAAD

Tumor-vs-normal expression box plot for SMIM15-AS1 RNA in PAAD.

Open the PAAD breakdown →

Exploration