Across TCGA patient cohorts, SMIM13 protein abundance is significantly associated with the RNA expression of many other genes, with 4,050 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SMIM13-associated genes across cancer lineages are TMCC2, SNCA, and RN7SL656P. Each is linked with SMIM13 in more than 2 cancer types. Because this analysis shows association rather than direction, both SMIM13-to-partner and partner-to-SMIM13 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SMIM13→partner) and Y-score (partner→SMIM13) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	TMCC2 →	+1.196	+0.660	<.001	<.001	3	3
GBM	SNCA →	+1.082	+0.554	<.001	<.001	3	2
LUAD	RN7SL656P →	+0.934	+0.645	<.001	.001	3	2
CCRCC	VN1R93P →	+0.224	+0.323	.001	.005	3	2
OV	CILK1 →	+0.650	+0.926	.002	.002	3	2
UCEC	SPCS1 →	-0.598	-0.770	.007	.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,050 associations by consensus.

Exploration

SMIM13 survival (RNA) · tumor vs normal (RNA) · all SMIM13 data types