SMG1P6

Across TCGA patient cohorts, SMG1P6 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,276 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SMG1P6-associated proteins across cancer lineages are NUP107, SF3B3, and SAE1. Each is linked with SMG1P6 in more than 3 cancer types. Because this analysis shows association rather than direction, both SMG1P6-to-partner and partner-to-SMG1P6 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SMG1P6 versus NUP107 in UCEC, with a Pearson correlation of 0.31.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SMG1P6→partner) and Y-score (partner→SMG1P6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	NUP107 →	+0.145	+0.635	<.001	.002	3	4
LSCC	SF3B3 →	+0.271	+0.785	<.001	<.001	3	4
HNSC	SAE1 →	+0.241	+0.551	<.001	.001	3	3
LSCC	CIAPIN1_S183 →	+0.821	+0.844	<.001	<.001	3	3
PDAC	MED8_S82 →	+0.525	+0.387	.003	<.001	3	3
LSCC	SF3A1 →	+0.212	+0.721	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,276 associations by consensus.

SMG1P6 vs NUP107 — UCEC

Explore this scatter interactively →