SMCP

Across TCGA patient cohorts, SMCP RNA expression is significantly associated with the go_rna of many other GO terms, with 6,801 significant associations in total. STAD shows the largest number of these associations.

The most reproducible SMCP-associated GO terms across cancer lineages are Nucleoside triphosphate biosynthetic process, Cellular response to gamma radiation, and Proton motive force-driven ATP synthesis. Each is linked with SMCP in more than 8 cancer types. Because this analysis shows association rather than direction, both SMCP-to-partner and partner-to-SMCP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Nucleoside triphosphate biosynthetic process grouped by SMCP-low versus SMCP-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SMCP→partner) and Y-score (partner→SMCP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Nucleoside triphosphate biosynthetic process →	+0.127	+0.067	<.001	<.001	3	9
STAD	Cellular response to gamma radiation →	+0.110	+0.070	<.001	<.001	3	9
STAD	Proton motive force-driven ATP synthesis →	+0.135	+0.058	<.001	<.001	3	9
STAD	Protein targeting to mitochondrion →	+0.108	+0.063	<.001	<.001	3	8
STAD	Midbrain development →	+0.092	+0.069	<.001	<.001	3	8
STAD	mRNA 3'-end processing →	+0.108	+0.063	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,801 associations by consensus.

Nucleoside triphosphate biosynthetic process by SMCP expression — STAD

Explore this box plot interactively →