SMCO4P1

Across TCGA patient cohorts, SMCO4P1 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,126 significant associations in total. STAD shows the largest number of these associations.

The most reproducible SMCO4P1-associated GO terms across cancer lineages are Endosomal transport, Regulation of DNA-templated transcription initiation, and Positive regulation of DNA-templated transcription initiation. Each is linked with SMCO4P1 in more than 9 cancer types. Because this analysis shows association rather than direction, both SMCO4P1-to-partner and partner-to-SMCO4P1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Endosomal transport grouped by SMCO4P1-low versus SMCO4P1-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SMCO4P1→partner) and Y-score (partner→SMCO4P1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Endosomal transport →	+0.079	+0.239	<.001	<.001	3	10
STAD	Regulation of DNA-templated transcription initiation →	+0.082	+0.247	<.001	<.001	3	9
STAD	Positive regulation of DNA-templated transcription initiation →	+0.080	+0.235	<.001	<.001	3	9
STAD	Regulation of peptidyl-lysine acetylation →	+0.074	+0.236	<.001	<.001	3	9
STAD	Positive regulation of telomerase activity →	+0.080	+0.248	<.001	<.001	3	9
STAD	Regulation of double-strand break repair via homologous recombination →	+0.074	+0.245	<.001	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,126 associations by consensus.

Endosomal transport by SMCO4P1 expression — STAD

Explore this box plot interactively →