SMARCE1P4

Across TCGA patient cohorts, SMARCE1P4 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,177 significant associations in total. KIRC shows the largest number of these associations.

The most reproducible SMARCE1P4-associated GO terms across cancer lineages are Microautophagy, Developmental growth involved in morphogenesis, and Endoplasmic reticulum organization. Each is linked with SMARCE1P4 in more than 7 cancer types. Because this analysis shows association rather than direction, both SMARCE1P4-to-partner and partner-to-SMARCE1P4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Microautophagy grouped by SMARCE1P4-low versus SMARCE1P4-high in MESO.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SMARCE1P4→partner) and Y-score (partner→SMARCE1P4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
MESO	Microautophagy →	+0.053	+0.072	.003	.003	3	8
KIRC	Developmental growth involved in morphogenesis →	+0.031	+0.027	<.001	<.001	3	8
KIRC	Endoplasmic reticulum organization →	+0.035	+0.017	<.001	<.001	3	7
KIRC	Regulation of cell junction assembly →	+0.028	+0.021	<.001	<.001	3	7
KIRC	Positive regulation of protein kinase activity →	+0.032	+0.019	<.001	<.001	3	7
KIRC	Lung cell differentiation →	+0.054	+0.016	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,177 associations by consensus.

Microautophagy by SMARCE1P4 expression — MESO

Explore this box plot interactively →