SMARCE1P3

Across TCGA patient cohorts, SMARCE1P3 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,920 significant associations in total. STAD shows the largest number of these associations.

The most reproducible SMARCE1P3-associated GO terms across cancer lineages are mRNA transport, Regulation of post-translational protein modification, and Protein methylation. Each is linked with SMARCE1P3 in more than 17 cancer types. Because this analysis shows association rather than direction, both SMARCE1P3-to-partner and partner-to-SMARCE1P3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, mRNA transport grouped by SMARCE1P3-low versus SMARCE1P3-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SMARCE1P3→partner) and Y-score (partner→SMARCE1P3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	mRNA transport →	+0.077	+0.100	<.001	<.001	3	18
STAD	Regulation of post-translational protein modification →	+0.066	+0.110	<.001	<.001	3	18
STAD	Protein methylation →	+0.054	+0.087	<.001	<.001	2	18
STAD	Nucleus organization →	+0.043	+0.083	<.001	<.001	3	17
STAD	Nucleobase-containing compound transport →	+0.069	+0.096	<.001	<.001	3	17
STAD	Peptidyl-lysine modification →	+0.057	+0.085	<.001	<.001	3	17

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,920 associations by consensus.

mRNA transport by SMARCE1P3 expression — STAD

Explore this box plot interactively →