SMARCE1

Across TCGA cell cohorts, SMARCE1 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,613 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible SMARCE1-associated GO terms across cancer lineages are mRNA export from nucleus, Nucleosome disassembly, and RNA export from nucleus. Each is linked with SMARCE1 in more than 12 cancer types. Because this analysis shows association rather than direction, both SMARCE1-to-partner and partner-to-SMARCE1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, mRNA export from nucleus grouped by SMARCE1-low versus SMARCE1-high in STOMACH.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SMARCE1→partner) and Y-score (partner→SMARCE1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STOMACH	mRNA export from nucleus →	+0.149	+1.245	<.001	.001	3	13
BLOOD_Lymphoma	Nucleosome disassembly →	+0.189	+0.825	<.001	<.001	3	12
SOFT_TISSUE	RNA export from nucleus →	+0.123	+0.571	<.001	.001	3	12
BLOOD_Lymphoma	Nuclear export →	+0.087	+0.905	<.001	<.001	3	12
BLOOD_Myeloma	DNA strand elongation involved in DNA replication →	+0.176	+0.719	<.001	<.001	3	12
STOMACH	Nucleic acid transport →	+0.124	+1.113	<.001	.003	3	11

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,613 associations by consensus.

mRNA export from nucleus by SMARCE1 expression — STOMACH

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