SMARCB1

Across TCGA patient cohorts, SMARCB1 RNA expression is significantly associated with the protein abundance of many other proteins, with 17,123 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SMARCB1-associated proteins across cancer lineages are ZBED4_S624, SMC4, and SNRPD3. Each is linked with SMARCB1 in more than 6 cancer types. Because this analysis shows association rather than direction, both SMARCB1-to-partner and partner-to-SMARCB1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SMARCB1 versus ZBED4_S624 in OV, with a Pearson correlation of 0.35.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SMARCB1→partner) and Y-score (partner→SMARCB1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OV	ZBED4_S624 →	+0.685	+0.664	.002	.006	3	7
OV	SMC4 →	+0.461	+0.675	<.001	<.001	3	5
PDAC	SNRPD3 →	+0.419	+0.243	.002	.002	3	5
OV	MAPK3 →	-0.348	-0.598	<.001	<.001	3	5
LUAD	ACAD8 →	-0.603	-0.258	<.001	.003	2	6
GBM	RBM14 →	+0.213	+0.366	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 17,123 associations by consensus.

SMARCB1 vs ZBED4_S624 — OV

Explore this scatter interactively →