SMARCA4

Across TCGA patient cohorts, SMARCA4 RNA expression is significantly associated with the protein abundance of many other proteins, with 16,545 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SMARCA4-associated proteins across cancer lineages are ILF3, NONO, and ELAVL1. Each is linked with SMARCA4 in more than 6 cancer types. Because this analysis shows association rather than direction, both SMARCA4-to-partner and partner-to-SMARCA4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SMARCA4 versus ILF3 in GBM, with a Pearson correlation of 0.59.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SMARCA4→partner) and Y-score (partner→SMARCA4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	ILF3 →	+0.255	+0.483	<.001	<.001	3	7
GBM	NONO →	+0.208	+0.433	<.001	<.001	3	6
GBM	ELAVL1 →	+0.326	+0.526	<.001	<.001	3	6
GBM	SF3B1 →	+0.225	+0.485	<.001	<.001	3	6
LUAD	DNMT1 →	+0.408	+0.698	<.001	<.001	3	6
GBM	GATAD2A →	+0.333	+0.453	<.001	.002	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 16,545 associations by consensus.

SMARCA4 vs ILF3 — GBM

Explore this scatter interactively →