SLK

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLK mutation is significantly associated with the total protein of many other genes, with 37 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLK-associated genes across cancer lineages are ACC_pS79, p62 Lck ligand, and Rab25. Each is linked with SLK in more than 1 cancer types. Because this analysis shows association rather than direction, both SLK-to-partner and partner-to-SLK results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ACC_pS79 grouped by SLK-low versus SLK-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLK→partner) and Y-score (partner→SLK) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECACC_pS79 →+0.225+1.415.022.04032
UCECp62 Lck ligand →+0.293+2.584.001<.00132
UCECRab25 →-0.242-1.222.010.01132
UCECCaspase-7-cleavedD198 →+0.662+2.221<.001<.00132
UCECCyclin-B1 →+0.533+2.502<.001.00132
COADFASN →+0.610+2.815.004.03631
Each partner links to its Q-omics profile. Showing the 6 strongest of 37 associations by consensus.

ACC_pS79 by SLK expression — UCEC

Box plot of ACC_pS79 in SLK-low vs SLK-high samples in UCEC.

Explore this box plot interactively →

Exploration