SLITRK3

Across TCGA cell cohorts, SLITRK3 RNA expression is significantly associated with the RNA expression of many other genes, with 4,078 significant associations in total. BONE shows the largest number of these associations.

The most reproducible SLITRK3-associated genes across cancer lineages are NDST3, HOXD13, and POU3F2. Each is linked with SLITRK3 in more than 3 cancer types. Because this analysis shows association rather than direction, both SLITRK3-to-partner and partner-to-SLITRK3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLITRK3 versus NDST3 in BONE, with a Pearson correlation of 0.73.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLITRK3→partner) and Y-score (partner→SLITRK3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BONE	NDST3 →	+1.169	+2.885	<.001	<.001	3	4
BONE	HOXD13 →	+2.903	+2.271	<.001	<.001	3	3
BONE	POU3F2 →	+3.129	+2.697	<.001	<.001	3	3
BONE	SLC35F1 →	+2.653	+3.163	<.001	<.001	3	3
BONE	KLHL32 →	+0.424	+3.352	.002	<.001	3	3
BONE	PTGER3 →	+3.524	+2.385	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,078 associations by consensus.

SLITRK3 vs NDST3 — BONE

Explore this scatter interactively →