SLIT1-AS1

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLIT1-AS1 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,543 significant associations in total. STAD shows the largest number of these associations.

The most reproducible SLIT1-AS1-associated GO terms across cancer lineages are Nucleus organization, Negative regulation of RNA splicing, and Positive regulation of double-strand break repair via nonhomologous end joining. Each is linked with SLIT1-AS1 in more than 13 cancer types. Because this analysis shows association rather than direction, both SLIT1-AS1-to-partner and partner-to-SLIT1-AS1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Nucleus organization grouped by SLIT1-AS1-low versus SLIT1-AS1-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SLIT1-AS1→partner) and Y-score (partner→SLIT1-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADNucleus organization →+0.090+0.134<.001<.001314
STADNegative regulation of RNA splicing →+0.093+0.119<.001<.001314
STADPositive regulation of double-strand break repair via nonhomologous end joining →+0.071+0.120<.001<.001313
STADTranscription by RNA polymerase I →+0.096+0.150<.001<.001313
STADPositive regulation of DNA repair →+0.084+0.156<.001<.001313
STADRegulation of organelle assembly →+0.082+0.140<.001<.001312
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,543 associations by consensus.

Nucleus organization by SLIT1-AS1 expression — STAD

Box plot of Nucleus organization in SLIT1-AS1-low vs SLIT1-AS1-high samples in STAD.

Explore this box plot interactively →

Exploration