SLFNL1-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, SLFNL1-AS1 RNA differs between tumor and matched normal tissue in 10 of 18 cancer types tested, making tumor–normal expression one of SLFNL1-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in kidney renal clear cell carcinoma (KIRC), where SLFNL1-AS1 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types SLFNL1-AS1 is over-expressed in tumor, although a few such as THCA and BLCA show the opposite, repressed pattern.

KIRC, HNSC, and STAD are the cancer types where SLFNL1-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in SLFNL1-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KIRCAllAll+0.228<.0019view →
HNSCAllAll+0.148<.0019view →
STADMaleII,III,IV+0.295<.0015view →
READAllAll+0.311.0024view →
COADFemaleII,III,IV+0.306<.0014view →
CHOLFemaleAll+1.183.0222view →
LUSCAllAll+0.271.0152view →
KIRPAllIV+0.270.0132view →
BLCAFemaleAll+0.243.0432view →
THCAFemaleAll−0.107.0192view →
BLCAMaleIV−0.377.0391view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 11 strongest of 10 lineages.

SLFNL1-AS1–KIRC

Tumor-vs-normal expression box plot for SLFNL1-AS1 RNA in KIRC.

Open the KIRC breakdown →

Exploration