SLF2

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLF2 mutation is significantly associated with the total protein of many other genes, with 39 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLF2-associated genes across cancer lineages are ERK2, Ku80, and p27_pT157. Each is linked with SLF2 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLF2-to-partner and partner-to-SLF2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ERK2 grouped by SLF2-low versus SLF2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLF2→partner) and Y-score (partner→SLF2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECERK2 →+0.131+1.392.039.01932
UCECKu80 →+0.244+1.857.001.00432
UCECp27_pT157 →-0.046-2.048.015.00532
UCECp70-S6K_pT389 →-0.195-1.584.001.03232
UCECPCNA →+0.198+1.584.005.01732
UCECShc_pY317 →-0.169-1.652<.001.00632
Each partner links to its Q-omics profile. Showing the 6 strongest of 39 associations by consensus.

ERK2 by SLF2 expression — UCEC

Box plot of ERK2 in SLF2-low vs SLF2-high samples in UCEC.

Explore this box plot interactively →

Exploration