SLCO5A1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLCO5A1 mutation is significantly associated with the RNA expression of many other genes, with 3,498 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLCO5A1-associated genes across cancer lineages are CHAF1B, OIP5, and CDCA2. Each is linked with SLCO5A1 in more than 4 cancer types. Because this analysis shows association rather than direction, both SLCO5A1-to-partner and partner-to-SLCO5A1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CHAF1B grouped by SLCO5A1-low versus SLCO5A1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLCO5A1→partner) and Y-score (partner→SLCO5A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCHAF1B →+0.467+1.601<.001.00135
UCECOIP5 →+0.625+1.523<.001<.00134
UCECCDCA2 →+0.705+2.400<.001<.00134
SKCMZFYVE19 →+0.317+2.372<.001.00234
LUSCSLC38A7 →+0.516+3.459.003.00533
UCECCCL5 →+1.378+2.060<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,498 associations by consensus.

CHAF1B by SLCO5A1 expression — UCEC

Box plot of CHAF1B in SLCO5A1-low vs SLCO5A1-high samples in UCEC.

Explore this box plot interactively →

Exploration