SLCO2B1

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLCO2B1 mutation is significantly associated with the RNA expression of many other genes, with 22 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible SLCO2B1-associated genes across cancer lineages are HRG, KAAG1, and FERD3L. Each is linked with SLCO2B1 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLCO2B1-to-partner and partner-to-SLCO2B1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, HRG grouped by SLCO2B1-low versus SLCO2B1-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLCO2B1→partner) and Y-score (partner→SLCO2B1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaHRG →+0.402+3.855<.001.00731
BLOOD_LeukemiaKAAG1 →+0.082+3.855<.001.00731
BLOOD_LeukemiaFERD3L →+0.018+4.384<.001.00631
BLOOD_LeukemiaDCLK3 →+0.159+3.769.004.00831
BLOOD_LeukemiaTMEM244 →+0.271+3.551<.001.00931
BLOOD_LeukemiaPNLIPRP3 →+0.008+3.551.007.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 22 associations by consensus.

HRG by SLCO2B1 expression — BLOOD_Leukemia

Box plot of HRG in SLCO2B1-low vs SLCO2B1-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration