SLCO1A2

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLCO1A2 mutation is significantly associated with the total protein of many other genes, with 45 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLCO1A2-associated genes across cancer lineages are AR, ERK2, and MYH11. Each is linked with SLCO1A2 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLCO1A2-to-partner and partner-to-SLCO1A2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, AR grouped by SLCO1A2-low versus SLCO1A2-high in LUSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLCO1A2→partner) and Y-score (partner→SLCO1A2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUSCAR →+0.158+3.468.014.00232
SKCMERK2 →+0.175+1.415.026.04532
SKCMMYH11 →-0.727-2.169.024.00332
SKCMTIGAR →+0.133+3.338.005.00432
SKCMBim →-0.265-2.459.007.01732
UCECSnail →-0.210-1.999.039.00832
Each partner links to its Q-omics profile. Showing the 6 strongest of 45 associations by consensus.

AR by SLCO1A2 expression — LUSC

Box plot of AR in SLCO1A2-low vs SLCO1A2-high samples in LUSC.

Explore this box plot interactively →

Exploration