SLC9B1

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC9B1 mutation is significantly associated with the RNA expression of many other genes, with 11 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible SLC9B1-associated genes across cancer lineages are TEX47, PDILT, and OR2T4. Each is linked with SLC9B1 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC9B1-to-partner and partner-to-SLC9B1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TEX47 grouped by SLC9B1-low versus SLC9B1-high in LUNG_SCLC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC9B1→partner) and Y-score (partner→SLC9B1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCTEX47 →+0.160+4.044.002.00931
LUNG_SCLCPDILT →+0.102+4.643<.001.00431
LUNG_SCLCOR2T4 →+0.062+4.643<.001.00431
LARGE_INTESTINEAVP →+0.048+3.217<.001.00631
LARGE_INTESTINEDNASE1L3 →+0.075+3.491.005.00831
LUNG_NSCLC_LUADCCL19 →+0.146+4.887<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 11 associations by consensus.

TEX47 by SLC9B1 expression — LUNG_SCLC

Box plot of TEX47 in SLC9B1-low vs SLC9B1-high samples in LUNG_SCLC.

Explore this box plot interactively →

Exploration