SLC7A11

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC7A11 mutation is significantly associated with the RNA expression of many other genes, with 5,465 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC7A11-associated genes across cancer lineages are CUEDC1, RN7SKP286, and RNF19BPY. Each is linked with SLC7A11 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC7A11-to-partner and partner-to-SLC7A11 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CUEDC1 grouped by SLC7A11-low versus SLC7A11-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC7A11→partner) and Y-score (partner→SLC7A11) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMCUEDC1 →+0.584+3.372.001.00432
SKCMRN7SKP286 →+0.033+4.110<.001.00532
ESCARNF19BPY →+0.020+5.068.003.00832
UCECRPS29P32 →+0.274+1.899<.001.00232
UCECFBXO7 →+0.481+2.557<.001<.00132
UCECRPL23AP82 →+0.557+2.917<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,465 associations by consensus.

CUEDC1 by SLC7A11 expression — SKCM

Box plot of CUEDC1 in SLC7A11-low vs SLC7A11-high samples in SKCM.

Explore this box plot interactively →

Exploration