SLC6A20

Across TCGA patient cohorts, SLC6A20 protein abundance is significantly associated with the RNA expression of many other genes, with 132 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible SLC6A20-associated genes across cancer lineages are SSBP1, ZNF29P, and UPK1B. Each is linked with SLC6A20 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC6A20-to-partner and partner-to-SLC6A20 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC6A20 versus SSBP1 in BRCA, with a Pearson correlation of 0.37.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC6A20→partner) and Y-score (partner→SLC6A20) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	SSBP1 →	+0.599	+0.870	.004	.004	3	1
BRCA	ZNF29P →	+1.402	+1.593	<.001	.001	3	1
BRCA	UPK1B →	+0.060	+0.866	.007	.004	3	1
BRCA	FN3KRP →	+0.456	+1.188	.001	.008	3	1
BRCA	CIAO1 →	+0.332	+0.828	.008	.007	3	1
BRCA	SLC22A8 →	+0.007	+1.295	.004	<.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 132 associations by consensus.

SLC6A20 vs SSBP1 — BRCA

Explore this scatter interactively →