Across TCGA patient cohorts, SLC6A17 protein abundance is significantly associated with the RNA expression of many other genes, with 2,928 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SLC6A17-associated genes across cancer lineages are PRODH, SEZ6L, and SOX10. Each is linked with SLC6A17 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC6A17-to-partner and partner-to-SLC6A17 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC6A17→partner) and Y-score (partner→SLC6A17) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	PRODH →	+0.865	+0.587	<.001	<.001	3	1
GBM	SEZ6L →	+1.298	+0.488	.003	<.001	3	1
GBM	SOX10 →	+1.119	+0.533	<.001	<.001	3	1
GBM	SEPTIN3 →	+1.590	+0.761	<.001	<.001	3	1
GBM	SUN2 →	+0.347	+0.393	.006	.004	3	1
GBM	RASL10A →	+0.932	+0.723	<.001	<.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,928 associations by consensus.

Exploration

SLC6A17 survival (RNA) · tumor vs normal (RNA) · all SLC6A17 data types