Across TCGA patient cohorts, SLC6A17-AS1 RNA expression is significantly associated with the RNA expression of many other genes, with 13,095 significant associations in total. UVM shows the largest number of these associations.

The most reproducible SLC6A17-AS1-associated genes across cancer lineages are SLC6A17, MCF2L2, and WDR17. Each is linked with SLC6A17-AS1 in more than 18 cancer types. Because this analysis shows association rather than direction, both SLC6A17-AS1-to-partner and partner-to-SLC6A17-AS1 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC6A17-AS1→partner) and Y-score (partner→SLC6A17-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKCM	SLC6A17 →	+2.961	+0.184	<.001	<.001	3	19
LGG	MCF2L2 →	+0.634	+0.037	<.001	<.001	3	11
LUAD	WDR17 →	+0.882	+0.009	<.001	.001	3	11
LUAD	PCSK1 →	+3.347	+0.009	<.001	.002	3	10
LUAD	LINC01345 →	+0.843	+0.009	<.001	.006	3	10
PCPG	EML5 →	+0.823	+0.130	<.001	.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 13,095 associations by consensus.

Exploration

SLC6A17-AS1 survival (RNA) · tumor vs normal (RNA) · all SLC6A17-AS1 data types