SLC6A17-AS1

RNA & survival
SurvivalRNAKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, SLC6A17-AS1 RNA is linked to patient survival in 15 of 34 cancer types, making it the most broadly survival-associated SLC6A17-AS1 data layer.

The strongest signal is observed in kidney renal clear cell carcinoma (KIRC), where higher SLC6A17-AS1 RNA is associated with worse disease-free survival. In most high-consensus cancer types, elevated SLC6A17-AS1 expression acts as an unfavorable survival marker, although some lineages such as UCS and LGG show a favorable association.

KIRC, UCEC, and BLCA are the cancer types where SLC6A17-AS1 RNA most reproducibly stratifies survival.

RNA survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KIRCDFSTertileII,III,IV0.1690.532<.001108view →
UCECDFSTertileAll0.3420.659<.00184view →
BLCADFSTertileIII,IV0.2330.557<.00172view →
LUSCOSTertileIII,IV0.1720.696<.00154view →
THCAOSTertileII,III,IV0.6110.979<.00145view →
COADOSTertileIV0.0890.676<.00136view →
SKCMOSQuartileIV0.5070.881.00431view →
UCSDFSTertileIII,IV0.6760.301.01228view →
UVMOSMedianAll0.4060.842.00525view →
STADDFSTertileAll0.5170.678.00318view →
LIHCOSTertileAll0.1280.704.01118view →
GBMOSTertileAll0.1010.421.0079view →
Pink = unfavorable, green = favorable. Showing the 12 strongest of 15 lineages.

Exploration