SLC6A17-AS1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC6A17-AS1 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,017 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SLC6A17-AS1-associated proteins across cancer lineages are PDE1A, NPTX2, and SEMA4D_S833. Each is linked with SLC6A17-AS1 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLC6A17-AS1-to-partner and partner-to-SLC6A17-AS1 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC6A17-AS1→partner) and Y-score (partner→SLC6A17-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMPDE1A →+0.850+0.374<.001<.00133
LSCCNPTX2 →+2.621+0.183.001.00233
GBMSEMA4D_S833 →+0.728+0.339<.001<.00132
GBMDNAJA1_S335 →+0.431+0.345<.001<.00132
PDACFAM3C →-0.337-0.163.005.00332
GBMABI2 →+0.281+0.403<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,017 associations by consensus.

Exploration