SLC6A13

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC6A13 RNA expression is significantly associated with the go_rna of many other GO terms, with 1,539 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible SLC6A13-associated GO terms across cancer lineages are Amino acid neurotransmitter reuptake, Gamma-aminobutyric acid reuptake, and Sodium ion transport. Each is linked with SLC6A13 in more than 9 cancer types. Because this analysis shows association rather than direction, both SLC6A13-to-partner and partner-to-SLC6A13 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Amino acid neurotransmitter reuptake grouped by SLC6A13-low versus SLC6A13-high in OVARY.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC6A13→partner) and Y-score (partner→SLC6A13) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVARYAmino acid neurotransmitter reuptake →+0.628+0.908<.001<.00139
OVARYGamma-aminobutyric acid reuptake →+0.628+0.908<.001<.00139
LUNG_NSCLC_LUSCSodium ion transport →-0.077-0.281.008.008110
BREASTSingle fertilization →-0.080-0.243<.001<.00138
SOFT_TISSUERegulation of RNA splicing →+0.046+0.268.003.00138
UPPER_AERODIGESTIVE_TRACTRegulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay →+0.081+0.317.003.00838
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,539 associations by consensus.

Amino acid neurotransmitter reuptake by SLC6A13 expression — OVARY

Box plot of Amino acid neurotransmitter reuptake in SLC6A13-low vs SLC6A13-high samples in OVARY.

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Exploration