SLC6A12-AS1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC6A12-AS1 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,384 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SLC6A12-AS1-associated proteins across cancer lineages are PPIB, UVRAG, and WDR7. Each is linked with SLC6A12-AS1 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLC6A12-AS1-to-partner and partner-to-SLC6A12-AS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC6A12-AS1 versus PPIB in GBM, with a Pearson correlation of -0.39.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC6A12-AS1→partner) and Y-score (partner→SLC6A12-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMPPIB →-0.345-0.527<.001<.00133
UCECUVRAG →+0.220+0.531<.001<.00132
GBMWDR7 →+0.416+0.684<.001<.00132
GBMYWHAG →+0.224+0.504.002<.00132
GBMZPR1 →-0.223-0.466<.001<.00132
GBMPKP4 →+0.443+0.498<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,384 associations by consensus.

SLC6A12-AS1 vs PPIB — GBM

Per-sample scatter of SLC6A12-AS1 vs PPIB in GBM (Pearson r = -0.39).

Explore this scatter interactively →

Exploration