SLC5A9

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC5A9 mutation is significantly associated with the RNA expression of many other genes, with 4,054 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SLC5A9-associated genes across cancer lineages are HMCES, IRAK1, and EMD. Each is linked with SLC5A9 in more than 2 cancer types. Because this analysis shows association rather than direction, both SLC5A9-to-partner and partner-to-SLC5A9 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, HMCES grouped by SLC5A9-low versus SLC5A9-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC5A9→partner) and Y-score (partner→SLC5A9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECHMCES →+0.298+1.720.002<.00133
UCECIRAK1 →+0.498+3.201<.001<.00133
SKCMEMD →+0.298+1.964.008.00933
UCECGPI →+0.394+1.917.001<.00133
UCECFGF21 →+0.424+1.831<.001<.00133
UCECCORO1C →+0.536+2.466<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,054 associations by consensus.

HMCES by SLC5A9 expression — UCEC

Box plot of HMCES in SLC5A9-low vs SLC5A9-high samples in UCEC.

Explore this box plot interactively →

Exploration