SLC5A5

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC5A5 mutation is significantly associated with the RNA expression of many other genes, with 826 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible SLC5A5-associated genes across cancer lineages are FAM180A, SCML2, and NLRP2B. Each is linked with SLC5A5 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC5A5-to-partner and partner-to-SLC5A5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, FAM180A grouped by SLC5A5-low versus SLC5A5-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC5A5→partner) and Y-score (partner→SLC5A5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaFAM180A →+0.056+4.321<.001.00232
LARGE_INTESTINESCML2 →+1.009+3.212.005.00632
LARGE_INTESTINENLRP2B →+0.075+2.455.005.00532
PANCREASUGT2B10 →+0.402+5.000<.001.00631
SOFT_TISSUEKRTAP5-11 →+0.030+5.977<.001.00131
LUNG_SCLCSPATA31A5 →+0.013+5.029<.001.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 826 associations by consensus.

FAM180A by SLC5A5 expression — BLOOD_Leukemia

Box plot of FAM180A in SLC5A5-low vs SLC5A5-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration