SLC4A11

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SLC4A11 mutation is significantly associated with the RNA expression of many other genes, with 583 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible SLC4A11-associated genes across cancer lineages are IFNA14, MTFMT, and NUP43. Each is linked with SLC4A11 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC4A11-to-partner and partner-to-SLC4A11 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, IFNA14 grouped by SLC4A11-low versus SLC4A11-high in SOFT_TISSUE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC4A11→partner) and Y-score (partner→SLC4A11) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SOFT_TISSUEIFNA14 →+0.032+5.369<.001.00432
LARGE_INTESTINEMTFMT →+0.615+3.459<.001.00132
LARGE_INTESTINENUP43 →+0.580+2.628<.001.00232
LARGE_INTESTINECYP4V2 →+1.070+3.169.001.00932
LARGE_INTESTINECCNB3 →+0.680+3.526<.001<.00132
LARGE_INTESTINEPRMT9 →+0.433+2.628.008.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 583 associations by consensus.

IFNA14 by SLC4A11 expression — SOFT_TISSUE

Box plot of IFNA14 in SLC4A11-low vs SLC4A11-high samples in SOFT_TISSUE.

Explore this box plot interactively →

Exploration