SLC49A4

Across TCGA cell cohorts, SLC49A4 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,936 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible SLC49A4-associated GO terms across cancer lineages are Endosomal transport, Autophagosome maturation, and Phospholipid biosynthetic process. Each is linked with SLC49A4 in more than 14 cancer types. Because this analysis shows association rather than direction, both SLC49A4-to-partner and partner-to-SLC49A4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Endosomal transport grouped by SLC49A4-low versus SLC49A4-high in STOMACH.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC49A4→partner) and Y-score (partner→SLC49A4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STOMACH	Endosomal transport →	+0.070	+1.190	<.001	.001	3	15
STOMACH	Autophagosome maturation →	+0.124	+1.448	<.001	.001	3	14
OESOPHAGUS	Phospholipid biosynthetic process →	+0.052	+0.710	<.001	<.001	2	14
STOMACH	Process utilizing autophagic mechanism →	+0.085	+1.185	<.001	.001	3	13
STOMACH	Autophagy →	+0.085	+1.185	<.001	.001	3	13
STOMACH	Vacuolar transport →	+0.073	+1.221	.001	<.001	3	13

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,936 associations by consensus.

Endosomal transport by SLC49A4 expression — STOMACH

Explore this box plot interactively →