SLC45A1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SLC45A1 protein abundance is significantly associated with the RNA expression of many other genes, with 2,669 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SLC45A1-associated genes across cancer lineages are KIF5C, RXFP1, and DLG3. Each is linked with SLC45A1 in more than 1 cancer types. Because this analysis shows association rather than direction, both SLC45A1-to-partner and partner-to-SLC45A1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC45A1 versus KIF5C in BRCA, with a Pearson correlation of 0.64.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC45A1→partner) and Y-score (partner→SLC45A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAKIF5C →+2.019+1.767.002.00532
GBMRXFP1 →+0.562+0.491.002<.00132
LSCCDLG3 →+0.908+1.666<.001.00532
BRCAPSMF1 →-0.504-1.304.002.00631
BRCAMRPL44 →+0.534+1.624.007.00531
BRCAUSP25 →+0.738+1.775.009.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,669 associations by consensus.

SLC45A1 vs KIF5C — BRCA

Per-sample scatter of SLC45A1 vs KIF5C in BRCA (Pearson r = 0.64).

Explore this scatter interactively →

Exploration